PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004505077.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family Dof
Protein Properties Length: 396aa    MW: 42926.9 Da    PI: 8.2756
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004505077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.95.3e-3948108262
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     +++al+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++
  XP_004505077.1  48 QQQALRCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 108
                     7899******************************************************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027012.4E-3350106IPR003851Zinc finger, Dof-type
ProDomPD0074781.0E-2751106IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.4652106IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105490IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MFGNCDEKTV TPNRWTQSEI DDHHKVSMAS NGSTRVMEKP GQDLVQQQQQ ALRCPRCDSS  60
NTKFCYYNNY SLSQPRHFCK ACKRYWTRGG TLRNVPVGGG CRKNKRVKRS STTHSSNNID  120
NSTNTIVASP SSSSNPTSAN SNPPSQLHNF DISNSTSNHI NTLLYGGGNG NSCHDVMNFP  180
FSTRFNSRVV SSSSSGYDNL QVNNSCLGLG FSSGLLMSGS GGEVNHHYHD AGYNRNGFSS  240
NNNNNHTLVS SYNSIFGSSS TSTNSLASTP VMTSLLSSTL LQQKFMSSTG TSSGGMKDDI  300
FHHEMKMEGN SSSEVAGIMA SKEVKLCEGQ NRLQEWNNVN ANGGVAVAFQ NQMEHLGLSD  360
TSSLYWNNHN SSNTATGLGV WSDQPNNIGP SVTSLI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004505077.10.0PREDICTED: dof zinc finger protein DOF1.4-like
TrEMBLA0A072UML91e-128A0A072UML9_MEDTR; Dof-type zinc finger DNA-binding family protein
STRINGGLYMA13G24600.13e-89(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45223356
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.21e-34Dof family protein